STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39555.1FG-GAP repeat-containing protein. (878 aa)    
Predicted Functional Partners:
EFL39336.1
Peptidase, S8A (subtilisin) subfamily; Belongs to the peptidase S8 family.
  
 0.883
EFL40710.1
Serine metalloprotease MprA.
  
 0.883
EFL41544.1
Peptidase, S8A (subtilisin) subfamily; Belongs to the peptidase S8 family.
  
 0.883
EFL39459.1
Conserved hypothetical protein.
    
   0.724
EFL39464.1
dTMP kinase.
    
   0.724
EFL37865.1
crp/Fnr family transcriptional regulator.
     
 0.678
EFL37963.1
crp/Fnr family transcriptional regulator.
     
 0.678
EFL39945.1
Conserved hypothetical protein.
    
 
 0.520
EFL40393.1
Membrane protein.
    
 
 0.520
EFL42491.1
Chitinase 63; Belongs to the glycosyl hydrolase 18 family.
    
 0.514
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.