STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL39567.1Integral membrane protein. (82 aa)    
Predicted Functional Partners:
EFL39568.1
D-alanyl-D-alanine carboxypeptidase.
       0.620
EFL40794.1
Regulatory protein.
  
     0.603
EFL43461.1
Hsp18-like protein.
  
     0.530
EFL37580.1
Conserved hypothetical protein.
  
     0.528
EFL42450.1
Integral membrane protein.
  
     0.527
EFL38274.1
Regulatory protein.
  
     0.468
EFL38997.1
Conserved hypothetical protein.
  
     0.441
EFL42117.1
Membrane protein.
  
     0.433
EFL41940.1
Conserved hypothetical protein.
  
     0.431
EFL41093.1
Conserved hypothetical protein.
  
     0.425
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.