STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39568.1D-alanyl-D-alanine carboxypeptidase. (458 aa)    
Predicted Functional Partners:
EFL40818.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 0.941
EFL41830.1
Penicillin-binding protein 3.
 
 
 0.867
EFL40305.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 
0.838
EFL40010.1
D-alanyl-D-alanine carboxypeptidase.
     
 0.817
EFL41373.1
Penicillin-binding protein 2.
  
 
 0.799
EFL39153.1
Penicillin-binding protein.
 
 
 0.726
EFL40354.1
Penicillin-binding protein.
 
 
 0.722
EFL42046.1
Penicillin-binding protein.
  
 
 0.685
EFL39378.1
Bifunctional penicillin-binding protein 1a/1b pona1.
   
 
 0.644
EFL40399.1
Penicillin-binding protein.
   
 
 0.644
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.