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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39569.1Integral membrane protein; Overlaps another CDS with the same product name. (305 aa)    
Predicted Functional Partners:
EFL39570.1
Integral membrane protein; Overlaps another CDS with the same product name.
       0.870
EFL39571.1
Integral membrane protein; Overlaps another CDS with the same product name; Belongs to the UbiA prenyltransferase family.
       0.870
EFL39572.1
PAP2 superfamily protein.
       0.870
EFL39573.1
Oxidoreductase, FAD-binding.
       0.782
EFL39574.1
Short-chain dehydrogenase/reductase family oxidoreductase.
  
    0.772
EFL39575.1
2',5' RNA ligase; Unextendable partial coding region.
       0.572
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.572
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
   
    0.493
EFL39009.1
Alpha-glucan phosphorylase.
  
  
 0.430
EFL41479.1
Integral membrane protein.
  
     0.424
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.