STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39570.1Integral membrane protein; Overlaps another CDS with the same product name. (157 aa)    
Predicted Functional Partners:
EFL39569.1
Integral membrane protein; Overlaps another CDS with the same product name.
       0.878
EFL39571.1
Integral membrane protein; Overlaps another CDS with the same product name; Belongs to the UbiA prenyltransferase family.
       0.878
EFL39572.1
PAP2 superfamily protein.
       0.878
EFL39573.1
Oxidoreductase, FAD-binding.
       0.776
EFL39574.1
Short-chain dehydrogenase/reductase family oxidoreductase.
       0.759
EFL40996.1
Integral membrane protein.
  
     0.757
EFL41088.1
Integral membrane protein.
 
 
 0.530
EFL41531.1
Conserved hypothetical protein.
  
     0.444
EFL39948.1
excisionase/Xis, DNA-binding protein.
  
    0.431
whiB-6
Conserved hypothetical protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.404
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.