STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39574.1Short-chain dehydrogenase/reductase family oxidoreductase. (251 aa)    
Predicted Functional Partners:
EFL39573.1
Oxidoreductase, FAD-binding.
 
  
 0.964
EFL39571.1
Integral membrane protein; Overlaps another CDS with the same product name; Belongs to the UbiA prenyltransferase family.
 
  
 0.945
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.875
EFL41895.1
Glutamate synthase large subunit.
    
  0.812
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
   
 0.805
EFL37540.1
Condensation domain-containing protein.
   
 0.805
EFL39572.1
PAP2 superfamily protein.
     
 0.794
EFL39371.1
Syringomycin synthetase.
  
 0.788
EFL39569.1
Integral membrane protein; Overlaps another CDS with the same product name.
  
    0.772
EFL43484.1
Polyketide synthase.
   
 0.772
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.