Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL39584.1Glycine betaine/L-proline ABC transporter, ATP-binding protein. (384 aa)    
Predicted Functional Partners:
EFL42284.1
Glycine betaine/proline ABC transporter, permease/substrate-binding protein.
 
 0.999
EFL39583.1
Glycine betaine-binding lipoprotein.
 
 0.995
EFL39585.1
Choline dehydrogenase.
 
   
 0.861
EFL38334.1
Proline/glycine betaine ABC transporter, permease.
 
  
 0.672
EFL41124.1
Conserved hypothetical protein.
 
  
 0.647
EFL41126.1
Osmoprotectant ABC transporter, permease.
 
  
 0.630
EFL38335.1
Proline/glycine betaine ABC transporter, permease.
 
  
 0.610
EFL39586.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.577
EFL41123.1
Permease binding-protein component.
 
 
 0.563
EFL38333.1
Secreted substrate-binding protein.
 
 
 0.561
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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