STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39611.1PspC domain-containing protein. (451 aa)    
Predicted Functional Partners:
EFL41755.1
Transcription regulator.
  
 
 0.982
EFL39610.1
Two-component system sensor kinase.
 
    0.938
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
   
 
 0.845
EFL39609.1
Two-component system response regulator.
 
  
 0.833
EFL40419.1
Membrane protein.
  
    0.831
EFL40484.1
Conserved hypothetical protein.
  
   0.820
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
   
 
 0.811
EFL37442.1
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.805
EFL37443.1
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.805
EFL42695.1
Hypothetical protein.
   
 
 0.805
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.