STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39615.1Pyridoxamine 5-phosphate oxidase, FMN-binding. (159 aa)    
Predicted Functional Partners:
EFL39613.1
Integral membrane protein.
       0.692
EFL41234.1
Secreted protein.
  
    0.675
EFL42286.1
Metal binding protein.
  
    0.675
EFL43135.1
ABC-type Fe3+ transport system.
  
    0.675
EFL43299.1
Iron compound ABC transporter, periplasmic iron compound-binding protein.
  
    0.675
EFL41675.1
Membrane protein.
   
    0.660
EFL41899.1
Toxic cation resistance protein; Unextendable partial coding region.
       0.569
EFL39614.1
Class II aldolase/adducin.
       0.562
EFL41895.1
Glutamate synthase large subunit.
     
 0.542
EFL42135.1
Ferric enterobactin transport ATP-binding protein.
  
  
 0.517
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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