STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39619.1Conserved hypothetical protein. (304 aa)    
Predicted Functional Partners:
EFL39620.1
Hypothetical protein.
      0.745
EFL39506.1
Integral membrane protein.
  
     0.738
EFL37700.1
Regulatory protein.
  
     0.716
EFL40403.1
Membrane protein.
  
     0.701
EFL37840.1
Conserved hypothetical protein.
  
     0.696
EFL40182.1
Conserved hypothetical protein.
  
     0.696
EFL42016.1
Conserved hypothetical protein.
  
     0.679
EFL39969.1
Alanine-rich protein.
  
     0.677
EFL42442.1
Secreted protein.
  
     0.655
EFL38239.1
Iron-sulfur protein.
  
     0.645
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.