STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39639.1Conserved hypothetical protein. (251 aa)    
Predicted Functional Partners:
EFL39638.1
Short-chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.804
EFL39637.1
MOSC domain-containing protein.
       0.753
EFL39636.1
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.709
EFL42295.1
Conserved hypothetical protein.
  
     0.658
EFL40240.1
Conserved hypothetical protein.
  
     0.607
EFL41582.1
Integral membrane protein.
  
     0.554
EFL41523.1
Membrane protein.
  
     0.488
EFL39535.1
Conserved hypothetical protein.
  
     0.467
EFL38226.1
Transcriptional regulator.
  
     0.430
EFL40817.1
Integral membrane protein.
  
     0.423
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.