Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
EFL39646.1Polysaccharide deacetylase. (292 aa)    
Predicted Functional Partners:
EFL42945.1
Polysaccharide deacetylase; Unextendable partial coding region.
  
     0.730
EFL39645.1
Secreted protein.
 
    
0.700
EFL38367.1
Polysaccharide deacetylase.
  
     0.695
EFL40264.1
Hydrolase.
  
     0.654
EFL39647.1
Conserved hypothetical protein.
       0.632
EFL42491.1
Chitinase 63; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.569
EFL40494.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
 
  0.481
groS
Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
       0.442
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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