Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFL37664.1 | tsaD | SSRG_00468 | SSRG_02458 | Conserved hypothetical protein. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.993 |
| EFL38780.1 | pheS | SSRG_01584 | SSRG_05108 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. | 0.660 |
| EFL38780.1 | pheT | SSRG_01584 | SSRG_05109 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.648 |
| EFL38780.1 | rsmA | SSRG_01584 | SSRG_03724 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.584 |
| EFL38780.1 | tsaD | SSRG_01584 | SSRG_02458 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.675 |
| EFL38780.1 | ychF | SSRG_01584 | SSRG_02160 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.712 |
| EFL39653.1 | EFL39655.1 | SSRG_02457 | SSRG_02459 | Conserved hypothetical protein. | Ribosomal-protein-alanine acetyltransferase. | 0.870 |
| EFL39653.1 | EFL39656.1 | SSRG_02457 | SSRG_02460 | Conserved hypothetical protein. | Peptidase M22, glycoprotease. | 0.870 |
| EFL39653.1 | tsaD | SSRG_02457 | SSRG_02458 | Conserved hypothetical protein. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.870 |
| EFL39655.1 | EFL39653.1 | SSRG_02459 | SSRG_02457 | Ribosomal-protein-alanine acetyltransferase. | Conserved hypothetical protein. | 0.870 |
| EFL39655.1 | EFL39656.1 | SSRG_02459 | SSRG_02460 | Ribosomal-protein-alanine acetyltransferase. | Peptidase M22, glycoprotease. | 0.946 |
| EFL39655.1 | EFL39658.1 | SSRG_02459 | SSRG_02462 | Ribosomal-protein-alanine acetyltransferase. | Conserved hypothetical protein. | 0.572 |
| EFL39655.1 | tsaD | SSRG_02459 | SSRG_02458 | Ribosomal-protein-alanine acetyltransferase. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.990 |
| EFL39656.1 | EFL39653.1 | SSRG_02460 | SSRG_02457 | Peptidase M22, glycoprotease. | Conserved hypothetical protein. | 0.870 |
| EFL39656.1 | EFL39655.1 | SSRG_02460 | SSRG_02459 | Peptidase M22, glycoprotease. | Ribosomal-protein-alanine acetyltransferase. | 0.946 |
| EFL39656.1 | EFL39658.1 | SSRG_02460 | SSRG_02462 | Peptidase M22, glycoprotease. | Conserved hypothetical protein. | 0.997 |
| EFL39656.1 | pheT | SSRG_02460 | SSRG_05109 | Peptidase M22, glycoprotease. | phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.478 |
| EFL39656.1 | tsaD | SSRG_02460 | SSRG_02458 | Peptidase M22, glycoprotease. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.998 |
| EFL39658.1 | EFL39655.1 | SSRG_02462 | SSRG_02459 | Conserved hypothetical protein. | Ribosomal-protein-alanine acetyltransferase. | 0.572 |
| EFL39658.1 | EFL39656.1 | SSRG_02462 | SSRG_02460 | Conserved hypothetical protein. | Peptidase M22, glycoprotease. | 0.997 |
page 1 of 3