STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39659.1Lipase. (428 aa)    
Predicted Functional Partners:
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.943
EFL39660.1
Alanine racemase.
     
 0.871
EFL39658.1
Conserved hypothetical protein.
       0.870
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
  
 0.862
EFL37540.1
Condensation domain-containing protein.
  
 0.862
EFL41633.1
Non-ribosomal peptide synthetase.
   
 0.818
EFL43484.1
Polyketide synthase.
  
 0.809
EFL41632.1
Dimodular nonribosomal peptide synthetase; Truncated CDS.
   
 0.702
EFL43485.1
Polyketide synthase.
  
 0.657
EFL43487.1
Polyketide synthase.
  
 0.657
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.