Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL39662.1Ricin B lectin:Parallel beta-helix repeat. (452 aa)    
Predicted Functional Partners:
EFL37738.1
Conserved hypothetical protein.
   
  
 0.785
EFL39661.1
YjeF family protein.
  
    0.716
EFL42401.1
Hypothetical protein.
  
     0.715
EFL38261.1
Conserved hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
  
     0.685
EFL42873.1
Endo-1,4-beta-xylanase B; Truncated CDS; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.675
EFL42915.1
alpha-L-arabinofuranosidase (Arabinosidase).
  
   
 0.657
EFL42751.1
Cellulose-binding, family II, bacterial type.
  
     0.633
EFL39663.1
YjeF family protein.
  
    0.612
EFL38799.1
Secreted sugar hydrolase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
     0.583
EFL41699.1
Ribosomal protein L18.
  
     0.559
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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