STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39675.1Membrane protein. (298 aa)    
Predicted Functional Partners:
EFL39674.1
Integral membrane protein.
 
     0.868
EFL40366.1
Membrane protein.
  
  0.795
EFL42016.1
Conserved hypothetical protein.
  
     0.762
EFL42708.1
Conserved hypothetical protein.
  
     0.762
EFL39969.1
Alanine-rich protein.
  
    0.761
EFL40457.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.761
EFL40389.1
Membrane protein.
  
    0.755
EFL39054.1
Conserved hypothetical protein.
  
   
 0.752
EFL40958.1
Integral membrane protein.
  
     0.732
EFL39028.1
Hypothetical hydrophilic protein.
  
     0.705
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.