Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rplD | rplM | SSRG_02508 | SSRG_02477 | 50S ribosomal protein L4/L1; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
| rplD | rplQ | SSRG_02508 | SSRG_02481 | 50S ribosomal protein L4/L1; Forms part of the polypeptide exit tunnel. | Ribosomal protein L17. | 0.999 |
| rplD | rplS | SSRG_02508 | SSRG_01654 | 50S ribosomal protein L4/L1; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.999 |
| rplD | rpmB | SSRG_02508 | SSRG_01685 | 50S ribosomal protein L4/L1; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.999 |
| rplD | rpmE | SSRG_02508 | SSRG_01897 | 50S ribosomal protein L4/L1; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.999 |
| rplD | rpsB | SSRG_02508 | SSRG_01643 | 50S ribosomal protein L4/L1; Forms part of the polypeptide exit tunnel. | Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
| rplD | rpsI | SSRG_02508 | SSRG_02476 | 50S ribosomal protein L4/L1; Forms part of the polypeptide exit tunnel. | Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rplD | rpsK | SSRG_02508 | SSRG_02483 | 50S ribosomal protein L4/L1; Forms part of the polypeptide exit tunnel. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
| rplD | rpsO | SSRG_02508 | SSRG_01574 | 50S ribosomal protein L4/L1; Forms part of the polypeptide exit tunnel. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
| rplD | rpsP | SSRG_02508 | SSRG_01658 | 50S ribosomal protein L4/L1; Forms part of the polypeptide exit tunnel. | Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
| rplM | rplD | SSRG_02477 | SSRG_02508 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L4/L1; Forms part of the polypeptide exit tunnel. | 0.999 |
| rplM | rplQ | SSRG_02477 | SSRG_02481 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L17. | 0.999 |
| rplM | rplS | SSRG_02477 | SSRG_01654 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.999 |
| rplM | rpmB | SSRG_02477 | SSRG_01685 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.999 |
| rplM | rpmE | SSRG_02477 | SSRG_01897 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.999 |
| rplM | rpsB | SSRG_02477 | SSRG_01643 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
| rplM | rpsI | SSRG_02477 | SSRG_02476 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rplM | rpsK | SSRG_02477 | SSRG_02483 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
| rplM | rpsO | SSRG_02477 | SSRG_01574 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
| rplM | rpsP | SSRG_02477 | SSRG_01658 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
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