STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39737.1Conserved hypothetical protein; Belongs to the UPF0336 family. (150 aa)    
Predicted Functional Partners:
EFL39736.1
MaoC family protein.
 
 
 0.999
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
   
 0.849
EFL37540.1
Condensation domain-containing protein.
   
 0.849
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.847
EFL43484.1
Polyketide synthase.
  
 0.840
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
 
     0.832
rpmG
50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
       0.769
EFL37611.1
Catalase.
   
  0.737
EFL39229.1
Catalase; Belongs to the catalase family.
   
  0.737
EFL42901.1
Catalase; Belongs to the catalase family.
   
  0.737
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.