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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39753.1N- superfamily bifunctional DNA primase/polymerase. (296 aa)    
Predicted Functional Partners:
EFL39754.1
Conserved hypothetical protein.
 
     0.919
EFL40529.1
Conserved hypothetical protein.
 
     0.741
EFL39749.1
Conserved hypothetical protein.
 
     0.733
EFL40910.1
Conserved hypothetical protein.
 
     0.729
EFL39755.1
Conserved domain-containing protein.
 
     0.583
EFL40530.1
Conserved hypothetical protein.
 
     0.547
EFL40120.1
Integrase; Belongs to the 'phage' integrase family.
 
     0.539
EFL40094.1
Conserved hypothetical protein.
 
     0.535
EFL40468.1
Transposase.
  
     0.529
EFL40533.1
ATP-binding protein.
 
  
 0.514
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.