STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39792.1Membrane protein. (406 aa)    
Predicted Functional Partners:
EFL39790.1
ABC transporter membrane protein.
 
     0.957
EFL39791.1
Antibiotic ABC transporter, ATP-binding protein.
 
     0.949
EFL41596.1
Cell wall hydrolase/autolysin.
    
 
 0.775
EFL41980.1
Integral membrane.
 
 
 
 0.765
EFL39793.1
Trans-hexaprenyltranstransferase; Belongs to the FPP/GGPP synthase family.
     
 0.753
EFL40341.1
Integral membrane protein.
   
 
 0.707
EFL40951.1
ABC lipoprotein transporter, permease component.
   
 
 0.707
EFL41317.1
Membrane protein.
   
 
 0.707
EFL42613.1
ABC transporter integral membrane protein.
   
 
 0.707
EFL42993.1
Transmembrane transporter.
   
 
 0.707
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.