Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL39797.1Glycosyl transferase, family 2. (436 aa)    
Predicted Functional Partners:
EFL37907.1
Creatinine amidohydrolase.
  
  
 0.908
EFL39798.1
Polysaccharide deacetylase.
 
    0.896
EFL42184.1
Succinoglycan biosynthesis protein.
    
0.868
EFL42185.1
Histidinol-phosphate phosphatase/glycosyl transferase, group 2 family protein.
 
  
  0.813
EFL38929.1
Sensory box/GGDEF domain/EAL domain-containing protein.
  
 
 0.809
EFL39796.1
Conserved hypothetical protein.
       0.710
EFL39795.1
Hydrolase.
   
  0.618
EFL40054.1
Septum site determining protein.
  
 
 0.602
EFL40384.1
Soj family protein.
  
 
 0.602
EFL42148.1
Soj family protein.
  
 
 0.602
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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