STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39797.1Glycosyl transferase, family 2. (436 aa)    
Predicted Functional Partners:
EFL37907.1
Creatinine amidohydrolase.
  
  
 0.966
EFL39798.1
Polysaccharide deacetylase.
 
 
  0.924
EFL42184.1
Succinoglycan biosynthesis protein.
    
0.870
EFL38929.1
Sensory box/GGDEF domain/EAL domain-containing protein.
  
 
 0.822
EFL42185.1
Histidinol-phosphate phosphatase/glycosyl transferase, group 2 family protein.
 
  
  0.822
EFL39796.1
Conserved hypothetical protein.
     
 0.725
EFL43038.1
Lactate 2-monooxygenase.
  
  
 0.598
EFL39799.1
Conserved hypothetical protein.
 
     0.585
EFL38550.1
GDP-mannose 6-dehydrogenase AlgD; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.569
EFL42146.1
Regulatory protein.
  
   0.560
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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