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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39799.1Conserved hypothetical protein. (414 aa)    
Predicted Functional Partners:
EFL39800.1
Conserved hypothetical protein.
 
 0.920
EFL38929.1
Sensory box/GGDEF domain/EAL domain-containing protein.
  
 
 0.844
EFL42184.1
Succinoglycan biosynthesis protein.
 
     0.831
EFL42185.1
Histidinol-phosphate phosphatase/glycosyl transferase, group 2 family protein.
 
  
 0.779
EFL41711.1
Alpha-amylase.
    
 0.763
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 
 0.760
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
 0.726
EFL39796.1
Conserved hypothetical protein.
 
   
 0.718
EFL39009.1
Alpha-glucan phosphorylase.
  
 
 0.698
EFL39469.1
Regulatory protein.
 
 
 0.685
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.