STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39826.1Glycosyl hydrolase. (338 aa)    
Predicted Functional Partners:
EFL42491.1
Chitinase 63; Belongs to the glycosyl hydrolase 18 family.
 
 0.922
EFL39076.1
Chitinase 63.
 
 0.886
EFL39414.1
Exochitinase 1; Belongs to the glycosyl hydrolase 18 family.
 
 0.856
EFL40863.1
PTS system, fructose-specific family, IIABC component.
     
 0.742
EFL38484.1
Sugar hydrolase.
     
 0.714
EFL41258.1
beta-N-Acetylglucosaminidase.
     
 0.674
EFL39558.1
beta-N-Acetylglucosaminidase.
     
 0.647
EFL41109.1
beta-N-acetylhexosaminidase.
     
 0.647
EFL37865.1
crp/Fnr family transcriptional regulator.
    
 0.592
EFL37963.1
crp/Fnr family transcriptional regulator.
    
 0.592
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.