STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39830.1Conserved hypothetical protein. (82 aa)    
Predicted Functional Partners:
EFL40261.1
Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family.
   
  
 0.672
EFL39829.1
Type IV peptidase; Belongs to the peptidase A24 family.
       0.610
EFL37993.1
Peroxiredoxin OsmC (Osmotically-inducible protein C).
   
    0.551
EFL41065.1
Organic hydroperoxide resistance protein.
   
    0.551
EFL39831.1
Conserved hypothetical protein.
 
      0.531
EFL37611.1
Catalase.
   
  
 0.500
EFL39229.1
Catalase; Belongs to the catalase family.
   
  
 0.500
EFL42901.1
Catalase; Belongs to the catalase family.
   
  
 0.500
EFL39827.1
Conserved hypothetical protein.
       0.463
mqnC
Radical SAM domain-containing protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).
       0.463
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.