STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL39839.1Conserved hypothetical protein. (284 aa)    
Predicted Functional Partners:
EFL39840.1
Membrane protein.
 
  
 0.976
EFL39836.1
Integral membrane protein; Overlaps another CDS with the same product name.
 
  
 0.962
EFL39837.1
Integral membrane protein; Overlaps another CDS with the same product name.
 
  
 0.962
EFL39838.1
Type II/IV secretion system protein.
 
 
  0.950
EFL39834.1
Septum determining protein.
 
     0.874
EFL39835.1
Conserved hypothetical protein.
 
     0.874
EFL39831.1
Conserved hypothetical protein.
 
     0.805
EFL37557.1
Integral membrane protein.
  
 
 0.771
EFL39393.1
Secreted protein.
 
     0.769
EFL39844.1
Secreted protein.
 
     0.765
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.