Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL39853.1Hypothetical protein; Belongs to the WXG100 family. (88 aa)    
Predicted Functional Partners:
EFL41073.1
FHA domain-containing protein.
  
 
 0.594
EFL38757.1
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.559
EFL38985.1
FtsK/SpoIIIE family protein.
   
 
 0.559
EFL39751.1
Conserved hypothetical protein.
   
 
 0.559
EFL39854.1
Cell division protein.
   
 
 0.559
EFL40126.1
Transfer protein traSA.
   
 
 0.559
EFL40472.1
Transfer protein traSA.
   
 
 0.559
EFL40530.1
Conserved hypothetical protein.
   
 
 0.559
EFL40908.1
Conserved hypothetical protein.
   
 
 0.559
EFL42502.1
Membrane protein.
   
 
 0.559
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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