STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39867.1Acetyltransferase. (174 aa)    
Predicted Functional Partners:
mqnE
Radical SAM domain-containing protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.
       0.818
EFL39869.1
AsnC-family transcriptional regulator.
       0.766
EFL39866.1
Membrane protein.
       0.761
EFL39870.1
Aromatic acid decarboxylase.
       0.674
EFL39862.1
TetR-family regulatory protein.
       0.620
EFL39871.1
Conserved hypothetical protein.
 
     0.523
EFL40509.1
Membrane protein.
  
     0.474
EFL40048.1
Conserved hypothetical protein.
  
     0.429
EFL40458.1
Conserved hypothetical protein; Unextendable partial coding region.
  
     0.415
EFL37277.1
Conserved hypothetical protein.
 
     0.414
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.