STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39869.1AsnC-family transcriptional regulator. (158 aa)    
Predicted Functional Partners:
mqnE
Radical SAM domain-containing protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.
       0.813
EFL39870.1
Aromatic acid decarboxylase.
       0.813
EFL39867.1
Acetyltransferase.
       0.774
EFL39866.1
Membrane protein.
       0.713
EFL42362.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
 0.658
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.616
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.616
EFL38514.1
Anthranilate synthase, phenazine specific; Unextendable partial coding region.
  
 
  0.542
EFL38172.1
Anthranilate synthase, phenazine specific.
   
 
  0.482
EFL41800.1
Anthranilate synthase, phenazine specific.
   
 
  0.482
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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