Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL39869.1AsnC-family transcriptional regulator. (158 aa)    
Predicted Functional Partners:
mqnE
Radical SAM domain-containing protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.
       0.812
EFL39870.1
Aromatic acid decarboxylase.
       0.812
EFL39867.1
Acetyltransferase.
       0.766
EFL39866.1
Membrane protein.
       0.696
EFL42362.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
 0.664
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.531
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.531
EFL39871.1
Conserved hypothetical protein.
       0.432
EFL42988.1
Threo-3-hydroxyaspartate ammonia-lyase.
       0.430
EFL39862.1
TetR-family regulatory protein.
       0.417
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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