Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL39878.1Transferase. (246 aa)    
Predicted Functional Partners:
EFL37831.1
Glycosyltransferase.
 
     0.792
EFL39879.1
Cytosine deaminase.
  
    0.775
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
  
 
 0.767
EFL42114.1
Phosphoserine phosphatase.
 
 
  0.744
EFL38820.1
Glycerophosphoryl diester phosphodiesterase.
  
 0.701
EFL38756.1
Membrane protein.
  
    0.683
EFL41011.1
Succinoglycan biosynthesis protein ExoA.
 
     0.652
EFL37876.1
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase.
    
 0.595
folD
Methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
  
  
 0.565
EFL37834.1
Nucleotide sugar-1-phosphate transferase.
 
  
  0.540
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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