close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39882.1Cytochrome C assembly protein. (369 aa)    
Predicted Functional Partners:
EFL39883.1
Cytochrome c biogenesis membrane protein.
 
  
 0.997
EFL39885.1
Thioredoxin family thiol:disulfide interchange protein.
 
  
 0.996
EFL39884.1
Cytochrome c biogenesis membrane protein.
 
  
 0.991
EFL42385.1
Sulfate transport system ATP-binding protein.
  
 0.985
EFL39938.1
uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase.
  
    0.937
EFL43364.1
Cytochrome c biogenesis protein, transmembrane region.
  
  
 0.929
hemL
Glutamate-1-semialdehyde-2,1-aminomutase.
 
  
 0.869
EFL39940.1
glutamyl-tRNA reductase (GluTR).
 
  
 0.790
EFL39887.1
Phosphoglycerate mutase.
  
    0.778
EFL41096.1
uroporphyrinogen-III synthase.
 
  
 0.675
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.