STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39884.1Cytochrome c biogenesis membrane protein. (257 aa)    
Predicted Functional Partners:
EFL39883.1
Cytochrome c biogenesis membrane protein.
 
  
 0.987
EFL39882.1
Cytochrome C assembly protein.
 
  
 0.986
EFL39885.1
Thioredoxin family thiol:disulfide interchange protein.
 
  
 0.976
EFL39887.1
Phosphoglycerate mutase.
  
    0.813
hemL
Glutamate-1-semialdehyde-2,1-aminomutase.
  
  
 0.791
EFL39886.1
Secreted protein.
       0.645
EFL39938.1
uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase.
  
    0.602
EFL39889.1
Conserved hypothetical protein.
       0.552
EFL39881.1
Serine/threonine-protein kinase AfsK.
       0.526
EFL41741.1
Conserved hypothetical protein.
   
    0.520
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.