STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39897.1Antibiotic resistance ATP-binding protein. (326 aa)    
Predicted Functional Partners:
EFL39896.1
ABC transporter, permease.
 
 
 0.978
EFL37365.1
Daunorubicin resistance transmembrane protein.
  
 
 0.854
EFL41688.1
ABC-transporter, transmembrane component.
  
 
 0.854
EFL39474.1
ABC transporter, permease component.
  
 
 0.853
EFL40015.1
ABC-2 type transporter.
  
 
 0.853
EFL41658.1
Multidrug ABC transporter permease.
  
 
 0.853
EFL42192.1
ABC transporter, permease component.
  
 
 0.853
EFL40316.1
Daunorubicin resistance transmembrane protein.
  
  
  0.829
EFL39071.1
ABC transporter, integral membrane subunit.
  
 
  0.787
EFL39898.1
Conserved hypothetical protein.
       0.786
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.