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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39921.1Aminotransferase, class I and II family protein. (404 aa)    
Predicted Functional Partners:
EFL43038.1
Lactate 2-monooxygenase.
 
 
 0.887
EFL41128.1
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.844
EFL39922.1
Conserved hypothetical protein.
       0.777
EFL39170.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
   
 
 0.689
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.677
EFL39106.1
Transposase; Truncated CDS.
  
 
 0.675
EFL38172.1
Anthranilate synthase, phenazine specific.
   
 
 0.663
EFL38514.1
Anthranilate synthase, phenazine specific; Unextendable partial coding region.
   
 
 0.663
EFL41800.1
Anthranilate synthase, phenazine specific.
   
 
 0.663
EFL41604.1
Conserved hypothetical protein.
   
    0.551
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.