Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL39921.1Aminotransferase, class I and II family protein. (404 aa)    
Predicted Functional Partners:
EFL41130.1
Oxidoreductase, FAD-binding.
    
  0.874
EFL43038.1
Lactate 2-monooxygenase.
  
 
 0.855
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
  0.854
EFL39170.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
   
 
 0.852
EFL38041.1
Citrate (Pro-3S)-lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
     
  0.850
EFL38155.1
Malate synthase A; Belongs to the malate synthase family.
     
  0.850
EFL38222.1
Glyoxylate carboligase; Belongs to the TPP enzyme family.
     
  0.850
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
     
  0.850
EFL41607.1
KHG/KDPG aldolase.
     
  0.850
EFL41698.1
Glutamine synthetase, type I.
    
  0.850
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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