Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL39948.1excisionase/Xis, DNA-binding protein. (81 aa)    
Predicted Functional Partners:
EFL41895.1
Glutamate synthase large subunit.
    
  0.841
EFL39949.1
Conserved hypothetical protein.
       0.773
EFL39367.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.730
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
     
 0.726
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
     
 0.726
EFL40863.1
PTS system, fructose-specific family, IIABC component.
     
  0.717
EFL39950.1
Acetoin utilization protein AcuC.
       0.708
EFL39951.1
Transmembrane transporter.
       0.708
EFL39989.1
L-aspartate oxidase (LASPO) (Quinolinate synthetase B).
     
  0.704
EFL39952.1
HAD-superfamily hydrolase subfamily IA.
       0.674
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.