STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL39962.1Conserved hypothetical protein. (116 aa)    
Predicted Functional Partners:
EFL39961.1
Integral membrane protein.
       0.822
EFL39960.1
UbiE/COQ5 methyltransferase.
       0.777
EFL39958.1
DrrB family ABC transporter efflux protein.
       0.747
EFL39959.1
Antibiotic resistance ABC transporter, efflux system, ATP-binding protein.
       0.747
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
  
    0.688
EFL42799.1
PE-PGRS family protein.
  
 
 0.622
EFL41596.1
Cell wall hydrolase/autolysin.
    
 0.611
EFL40010.1
D-alanyl-D-alanine carboxypeptidase.
  
 
 0.599
EFL39855.1
Serine/threonine-protein kinase AfsK; Unextendable partial coding region.
  
  
 0.574
EFL39469.1
Regulatory protein.
  
     0.528
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.