Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL39967.1Exopolyphosphatase (ppx). (310 aa)    
Predicted Functional Partners:
EFL40969.1
Exopolyphosphatase (ppx).
  
  
0.909
EFL42424.1
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
 
 0.885
EFL38717.1
GTP diphosphokinase.
   
 
 0.863
EFL40109.1
GTP pyrophosphokinase.
   
 
 0.863
EFL39965.1
TetR family transcriptional regulator.
       0.782
EFL39966.1
AP endonuclease, family 2 protein.
       0.782
EFL43046.1
Phosphatase.
     
  0.772
EFL43047.1
Exopolyphosphatase (ppx).
     
  0.772
EFL39968.1
Conserved hypothetical protein.
       0.745
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.707
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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