STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL39984.1Lsr2 protein. (111 aa)    
Predicted Functional Partners:
EFL39985.1
GNAT family acetyltransferase.
       0.734
EFL39986.1
BlaI/MecI/CopY family transcriptional regulator.
       0.734
EFL39300.1
Conserved hypothetical protein.
  
     0.655
EFL41554.1
Conserved hypothetical protein.
  
     0.576
EFL38945.1
Methionine synthase, vitamin-B12 independent.
  
     0.556
EFL39988.1
Nicotinate-nucleotide diphosphorylase; Belongs to the NadC/ModD family.
       0.552
EFL39989.1
L-aspartate oxidase (LASPO) (Quinolinate synthetase B).
       0.552
EFL39990.1
NADP oxidoreductase coenzyme F420-dependent family protein.
       0.552
EFL39991.1
L-allo-threonine aldolase.
       0.552
EFL41026.1
Conserved hypothetical protein.
  
     0.523
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.