Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL39990.1NADP oxidoreductase coenzyme F420-dependent family protein. (326 aa)    
Predicted Functional Partners:
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
 
  
 0.856
EFL39991.1
L-allo-threonine aldolase.
       0.766
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
 
   
 0.756
EFL39985.1
GNAT family acetyltransferase.
 
     0.653
EFL39989.1
L-aspartate oxidase (LASPO) (Quinolinate synthetase B).
 
   
 0.610
EFL39984.1
Lsr2 protein.
       0.552
EFL39986.1
BlaI/MecI/CopY family transcriptional regulator.
       0.552
EFL39988.1
Nicotinate-nucleotide diphosphorylase; Belongs to the NadC/ModD family.
       0.552
EFL39992.1
Transcriptional regulator.
       0.467
EFL39995.1
Two-component system response regulator.
       0.453
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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