STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39994.1Tunicamycin resistance protein. (207 aa)    
Predicted Functional Partners:
EFL39995.1
Two-component system response regulator.
  
  
 0.785
EFL39996.1
Two component sensor kinase.
  
  
 0.633
EFL39448.1
Sel1 repeat superfamily protein.
  
     0.621
EFL42971.1
Conserved hypothetical protein.
   
    0.567
EFL43340.1
Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
     0.550
EFL37698.1
Conserved hypothetical protein.
   
    0.518
EFL37350.1
Conserved hypothetical protein.
  
     0.499
EFL41347.1
Conserved hypothetical protein.
  
     0.474
EFL41326.1
Secreted protein.
  
    0.459
EFL37345.1
Secreted protein.
   
    0.430
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.