STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40020.1Conserved hypothetical protein. (165 aa)    
Predicted Functional Partners:
EFL41175.1
Conserved hypothetical protein.
  
   0.816
EFL38241.1
Regulatory protein.
 
   0.810
EFL38467.1
Conserved hypothetical protein.
  
   0.788
EFL37580.1
Conserved hypothetical protein.
  
     0.755
EFL40850.1
Conserved hypothetical protein.
  
     0.755
EFL40794.1
Regulatory protein.
  
    0.746
EFL40019.1
Xre family toxin-antitoxin system, antitoxin component.
 
     0.745
EFL40140.1
Regulatory protein.
  
     0.742
EFL39709.1
Regulatory protein.
  
     0.739
EFL43025.1
Conserved hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
  
   0.738
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.