Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40045.1Conserved hypothetical protein. (145 aa)    
Predicted Functional Partners:
EFL40046.1
anti-sigma-B factor antagonist (Anti-anti-sigma-B factor); Belongs to the anti-sigma-factor antagonist family.
 
 
 0.986
EFL43025.1
Conserved hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.824
EFL40991.1
Conserved hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.811
EFL37444.1
Conserved hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
 
   0.802
EFL39134.1
Anti-sigma factor antagonist.
  
 
 0.784
EFL39066.1
Conserved hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
 
   0.767
EFL40792.1
Conserved hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
 
   0.755
EFL40506.1
Conserved hypothetical protein.
  
     0.746
EFL39949.1
Conserved hypothetical protein.
  
     0.718
hppA
V-type H(+)-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.
       0.715
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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