STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40056.1Oxidoreductase; Unextendable partial coding region. (276 aa)    
Predicted Functional Partners:
EFL40057.1
ATP-binding protein.
 
     0.805
EFL40649.1
Conserved hypothetical protein.
  
     0.734
EFL37481.1
PTS system, IIBC component.
     
  0.723
dnaK
Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 
 0.696
dnaK-2
Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 
 0.696
EFL38788.1
GNAT family acetyltransferase.
  
     0.616
EFL38945.1
Methionine synthase, vitamin-B12 independent.
 
     0.605
EFL40055.1
HAD-superfamily subfamily IB hydrolase.
      
 0.555
EFL40063.1
Integral membrane transporter.
 
     0.550
EFL40716.1
Conserved hypothetical protein.
  
     0.487
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.