STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40058.1Secreted protein. (422 aa)    
Predicted Functional Partners:
EFL40059.1
Sulfate permease (SulP) family inorganic anion transporter.
       0.502
EFL40060.1
Carbonate dehydratase.
       0.478
EFL42232.1
Conserved hypothetical protein.
  
     0.469
EFL41587.1
Secreted protein; Overlaps another CDS with the same product name.
  
     0.452
EFL41305.1
Membrane protein.
  
     0.432
EFL40494.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
 
  0.423
EFL42402.1
Polyketide cyclase/dehydrase superfamily protein.
  
     0.419
EFL40063.1
Integral membrane transporter.
 
     0.407
EFL40992.1
Conserved hypothetical protein.
  
     0.406
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.