STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40071.1Endoribonuclease L-PSP family protein. (155 aa)    
Predicted Functional Partners:
EFL40069.1
Hydrolase.
 
    0.769
EFL40070.1
NUDIX family hydrolase.
  
    0.736
EFL40072.1
ATPase.
       0.722
EFL40073.1
Ion-transporting ATPase.
       0.694
EFL39025.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
  0.681
EFL38172.1
Anthranilate synthase, phenazine specific.
    
  0.579
EFL38514.1
Anthranilate synthase, phenazine specific; Unextendable partial coding region.
    
  0.579
EFL41800.1
Anthranilate synthase, phenazine specific.
    
  0.579
EFL38164.1
Isochorismatase.
     
  0.563
EFL40165.1
Peptide hydrolase.
       0.489
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.