STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40072.1ATPase. (325 aa)    
Predicted Functional Partners:
EFL40073.1
Ion-transporting ATPase.
 
    
0.871
pyrF
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
    
 
 0.802
EFL40070.1
NUDIX family hydrolase.
 
     0.765
EFL41789.1
Cyclase/dehydrase.
 
     0.752
EFL40649.1
Conserved hypothetical protein.
  
     0.748
EFL40071.1
Endoribonuclease L-PSP family protein.
       0.736
EFL39946.1
Acyltransferase.
  
     0.711
EFL41141.1
Mov34/MPN/PAD-1 family protein.
  
   0.705
EFL40642.1
PbsX family transcriptional regulator.
  
     0.702
EFL40069.1
Hydrolase.
       0.673
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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