STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40073.1Ion-transporting ATPase. (438 aa)    
Predicted Functional Partners:
EFL40072.1
ATPase.
 
    
0.870
EFL41790.1
Conserved hypothetical protein.
  
  
  0.805
EFL40070.1
NUDIX family hydrolase.
 
     0.768
EFL41789.1
Cyclase/dehydrase.
 
    0.750
EFL39946.1
Acyltransferase.
  
     0.738
EFL41141.1
Mov34/MPN/PAD-1 family protein.
  
   0.738
pyrF
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
    
   0.728
EFL40649.1
Conserved hypothetical protein.
  
     0.716
EFL40069.1
Hydrolase.
 
     0.697
EFL40071.1
Endoribonuclease L-PSP family protein.
       0.694
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.