STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40076.1Transposase. (149 aa)    
Predicted Functional Partners:
EFL37297.1
IS4 family transposase.
 
     0.773
EFL37261.1
IS4 family Transposase.
 
     0.771
EFL40468.1
Transposase.
 
     0.767
EFL37316.1
IS4 family transposase.
  
     0.644
EFL43530.1
Transposase.
  
     0.637
EFL40077.1
Hypothetical protein.
       0.594
EFL39903.1
Transposase.
  
     0.590
EFL37278.1
IS4 family transposase; Truncated CDS.
  
     0.584
EFL40078.1
Hypothetical protein.
       0.486
EFL40079.1
Hypothetical protein.
       0.486
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.