STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40081.1LuxR family transcriptional regulator. (80 aa)    
Predicted Functional Partners:
EFL42362.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
 0.658
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.616
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.616
EFL38172.1
Anthranilate synthase, phenazine specific.
   
 
  0.482
EFL38514.1
Anthranilate synthase, phenazine specific; Unextendable partial coding region.
   
 
  0.482
EFL41800.1
Anthranilate synthase, phenazine specific.
   
 
  0.482
EFL40080.1
Hypothetical protein.
       0.432
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.