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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40083.1Ser/Thr protein phosphatase. (308 aa)    
Predicted Functional Partners:
EFL40084.1
Integral membrane regulator.
       0.790
EFL40082.1
YqeY family protein.
       0.781
EFL38387.1
Conserved hypothetical protein.
  
     0.711
EFL41531.1
Conserved hypothetical protein.
  
     0.689
EFL40373.1
Conserved hypothetical protein; Belongs to the UPF0232 family.
  
     0.662
xseB
Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
 
     0.647
EFL41732.1
Integral membrane protein.
  
     0.645
EFL38654.1
Conserved hypothetical protein.
  
     0.639
EFL40916.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.639
EFL37203.1
Single-strand binding protein.
  
     0.625
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.