STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40132.1OmpA/MotB family protein. (585 aa)    
Predicted Functional Partners:
EFL39170.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
   
 
 0.977
EFL40310.1
Non-specific serine/threonine protein kinase.
   
 
 0.936
EFL40311.1
Serine/threonine-protein kinase PksC.
   
 
 0.936
EFL40355.1
Non-specific serine/threonine protein kinase.
   
 
 0.936
EFL41806.1
Serine/threonine-protein kinase PK-1; Truncated CDS; unextendable partial coding region.
   
 
 0.936
EFL42990.1
Conserved hypothetical protein.
   
 
 0.936
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
 
 
 0.880
EFL42695.1
Hypothetical protein.
  
 
 0.860
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
 
 
 0.853
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.848
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.